Read and Write

XLSX

Section titled XLSX

Reading

Section titled Reading

FSharp

open ARCtrl

let investigation = XlsxController.Investigation.fromXlsxFile("isa.investigation.xlsx")
let study,_ = XlsxController.Study.fromXlsxFile("isa.study.xlsx") // the second value are registered assays
let assay = XlsxController.Assay.fromXlsxFile("isa.assay.xlsx")
let datamap = XlsxController.Datamap.fromXlsxFile("isa.datamap.xlsx")

JavaScript

import { XlsxController } from "@nfdi4plants/arctrl";

let investigation = XlsxController.Investigation.fromXlsxFile("isa.investigation.xlsx")
let study = XlsxController.Study.fromXlsxFile("isa.study.xlsx")
let assay = XlsxController.Assay.fromXlsxFile("isa.assay.xlsx")
let datamap = XlsxController.Datamap.fromXlsxFile("isa.datamap.xlsx")

Python

from arctrl.arctrl import XlsxController

investigation = XlsxController.Investigation().from_xlsx_file("isa.investigation.xlsx")
study = XlsxController.Study().from_xlsx_file("isa.study.xlsx")
assay = XlsxController.Assay().from_xlsx_file("isa.assay")
datamap = XlsxController.Datamap().from_xlsx_file("isa.datamap.xlsx")

Writing

Section titled Writing

FSharp

open ARCtrl

XlsxController.Investigation.toXlsxFile("isa.investigation.xlsx",investigation)
XlsxController.Study.toXlsxFile("isa.study.xlsx",study)
XlsxController.Assay.toXlsxFile("isa.assay.xlsx",assay)
XlsxController.Datamap.toXlsxFile("isa.datamap.xlsx",datamap)

JavaScript

import { XlsxController } from "@nfdi4plants/arctrl";

XlsxController.Investigation.toXlsxFile("isa.investigation.xlsx", investigation)
XlsxController.Study.toXlsxFile("isa.study.xlsx", study)
XlsxController.Assay.toXlsxFile("isa.assay.xlsx", assay)
XlsxController.Datamap.toXlsxFile("isa.datamap.xlsx", datamap)

Python

from arctrl.arctrl import XlsxController

XlsxController.Investigation().to_xlsx_file("isa.investigation.xlsx",investigation)
XlsxController.Study().to_xlsx_file("isa.study.xlsx",study)
XlsxController.Assay().to_xlsx_file("isa.assay.xlsx",assay)
XlsxController.Datamap().to_xlsx_file("isa.datamap.xlsx",datamap)

Json

Section titled Json

Reading

Section titled Reading

FSharp

open ARCtrl

let investigation = JsonController.Investigation.fromISAJsonString(myJson)
let study,_ = JsonController.Study.fromISAJsonString(myJson) // the second value are registered assays
let assay = JsonController.Assay.fromISAJsonString(myJson)

JavaScript

import { JsonController } from "@nfdi4plants/arctrl";

let investigation = JsonController.Investigation.fromISAJsonString(myJson)
let study = JsonController.Study.fromISAJsonString(myJson)[0] // the second value are registered assays
let assay = JsonController.Assay.fromISAJsonString(myJson)

Python

from arctrl.arctrl import  JsonController

investigation = JsonController.Investigation().from_json_string(myJsonString)
study = JsonController.Study().from_json_string(myJsonString)
assay = JsonController.Assay().from_json_string(myJsonString)

Writing

Section titled Writing

FSharp

open ARCtrl

JsonController.Investigation.toISAJsonString(investigation,spaces = 2)
JsonController.Study.toISAJsonString(study,spaces = 2)
JsonController.Assay.toISAJsonString(assay,spaces = 2)

JavaScript

import { JsonController } from "@nfdi4plants/arctrl";

JsonController.Investigation.toISAJsonString(investigation)
JsonController.Study.toISAJsonString(study)
JsonController.Assay.toISAJsonString(assay)

Python

from arctrl.arctrl import  JsonController

JsonController.Investigation().to_json_string(investigation)
JsonController.Study().to_json_string(study)
JsonController.Assay().to_json_string(assay)