Header menu logo ARCTokenization

ARCMock Type

Namespace: ARCTokenization
Assembly: ARCTokenization.dll
Base Type: obj

Static members

Static member Description

ARCMock.AssayMetadataTokens(?ASSAY, ?Assay_Measurement_Type, ?Assay_Measurement_Type_Term_Accession_Number, ?Assay_Measurement_Type_Term_Source_REF, ?Assay_Technology_Type, ?Assay_Technology_Type_Term_Source_REF, ?Assay_Technology_Platform, ?Assay_File_Name, ?ASSAY_PERFORMERS, ?Assay_Performer_Last_Name, ?Assay_Performer_First_Name, ?Assay_Performer_Mid_Initials, ?Assay_Performer_Email, ?Assay_Performer_Phone, ?Assay_Performer_Fax, ?Assay_Performer_Address, ?Assay_Performer_Affiliation, ?Assay_Performer_Roles, ?Assay_Performer_Roles_Term_Accession_Number, ?Assay_Performer_Roles_Term_Source_REF)

Full Usage: ARCMock.AssayMetadataTokens(?ASSAY, ?Assay_Measurement_Type, ?Assay_Measurement_Type_Term_Accession_Number, ?Assay_Measurement_Type_Term_Source_REF, ?Assay_Technology_Type, ?Assay_Technology_Type_Term_Source_REF, ?Assay_Technology_Platform, ?Assay_File_Name, ?ASSAY_PERFORMERS, ?Assay_Performer_Last_Name, ?Assay_Performer_First_Name, ?Assay_Performer_Mid_Initials, ?Assay_Performer_Email, ?Assay_Performer_Phone, ?Assay_Performer_Fax, ?Assay_Performer_Address, ?Assay_Performer_Affiliation, ?Assay_Performer_Roles, ?Assay_Performer_Roles_Term_Accession_Number, ?Assay_Performer_Roles_Term_Source_REF)

Parameters:
    ?ASSAY : string seq
    ?Assay_Measurement_Type : string seq
    ?Assay_Measurement_Type_Term_Accession_Number : string seq
    ?Assay_Measurement_Type_Term_Source_REF : string seq
    ?Assay_Technology_Type : string seq
    ?Assay_Technology_Type_Term_Source_REF : string seq
    ?Assay_Technology_Platform : string seq
    ?Assay_File_Name : string seq
    ?ASSAY_PERFORMERS : string seq
    ?Assay_Performer_Last_Name : string seq
    ?Assay_Performer_First_Name : string seq
    ?Assay_Performer_Mid_Initials : string seq
    ?Assay_Performer_Email : string seq
    ?Assay_Performer_Phone : string seq
    ?Assay_Performer_Fax : string seq
    ?Assay_Performer_Address : string seq
    ?Assay_Performer_Affiliation : string seq
    ?Assay_Performer_Roles : string seq
    ?Assay_Performer_Roles_Term_Accession_Number : string seq
    ?Assay_Performer_Roles_Term_Source_REF : string seq

Returns: CvParam list list

returns a mock list of CvParams lists which each represent a tokenized row of assay metadata. each mandatory row is present, containing at least one CvParam annotated as MetadataSectionKey (the first column of an ISA-XLSX assay metadata sheet). each row can be expanded with additional CvParams by setting the respective optional argument.

?ASSAY : string seq
?Assay_Measurement_Type : string seq
?Assay_Measurement_Type_Term_Accession_Number : string seq
?Assay_Measurement_Type_Term_Source_REF : string seq
?Assay_Technology_Type : string seq
?Assay_Technology_Type_Term_Source_REF : string seq
?Assay_Technology_Platform : string seq
?Assay_File_Name : string seq
?ASSAY_PERFORMERS : string seq
?Assay_Performer_Last_Name : string seq
?Assay_Performer_First_Name : string seq
?Assay_Performer_Mid_Initials : string seq
?Assay_Performer_Email : string seq
?Assay_Performer_Phone : string seq
?Assay_Performer_Fax : string seq
?Assay_Performer_Address : string seq
?Assay_Performer_Affiliation : string seq
?Assay_Performer_Roles : string seq
?Assay_Performer_Roles_Term_Accession_Number : string seq
?Assay_Performer_Roles_Term_Source_REF : string seq
Returns: CvParam list list

ARCMock.InvestigationMetadataTokens(?ONTOLOGY_SOURCE_REFERENCE, ?Term_Source_Name, ?Term_Source_File, ?Term_Source_Version, ?Term_Source_Description, ?INVESTIGATION, ?Investigation_Identifier, ?Investigation_Title, ?Investigation_Description, ?Investigation_Submission_Date, ?Investigation_Public_Release_Date, ?INVESTIGATION_PUBLICATIONS, ?Investigation_Publication_PubMed_ID, ?Investigation_Publication_DOI, ?Investigation_Publication_Author_List, ?Investigation_Publication_Title, ?Investigation_Publication_Status, ?Investigation_Publication_Status_Term_Accession_Number, ?Investigation_Publication_Status_Term_Source_REF, ?INVESTIGATION_CONTACTS, ?Investigation_Person_Last_Name, ?Investigation_Person_First_Name, ?Investigation_Person_Mid_Initials, ?Investigation_Person_Email, ?Investigation_Person_Phone, ?Investigation_Person_Fax, ?Investigation_Person_Address, ?Investigation_Person_Affiliation, ?Investigation_Person_Roles, ?Investigation_Person_Roles_Term_Accession_Number, ?Investigation_Person_Roles_Term_Source_REF, ?Comment_ORCID, ?STUDY, ?Study_Identifier, ?Study_Title, ?Study_Description, ?Study_Submission_Date, ?Study_Public_Release_Date, ?Study_File_Name, ?STUDY_DESIGN_DESCRIPTORS, ?Study_Design_Type, ?Study_Design_Type_Term_Accession_Number, ?Study_Design_Type_Term_Source_REF, ?STUDY_PUBLICATIONS, ?Study_Publication_PubMed_ID, ?Study_Publication_DOI, ?Study_Publication_Author_List, ?Study_Publication_Title, ?Study_Publication_Status, ?Study_Publication_Status_Term_Accession_Number, ?Study_Publication_Status_Term_Source_REF, ?STUDY_FACTORS, ?Study_Factor_Name, ?Study_Factor_Type, ?Study_Factor_Type_Term_Accession_Number, ?Study_Factor_Type_Term_Source_REF, ?STUDY_ASSAYS, ?Study_Assay_Measurement_Type, ?Study_Assay_Measurement_Type_Term_Accession_Number, ?Study_Assay_Measurement_Type_Term_Source_REF, ?Study_Assay_Technology_Type, ?Study_Assay_Technology_Type_Term_Accession_Number, ?Study_Assay_Technology_Type_Term_Source_REF, ?Study_Assay_Technology_Platform, ?Study_Assay_File_Name, ?STUDY_PROTOCOLS, ?Study_Protocol_Name, ?Study_Protocol_Type, ?Study_Protocol_Type_Term_Accession_Number, ?Study_Protocol_Type_Term_Source_REF, ?Study_Protocol_Description, ?Study_Protocol_URI, ?Study_Protocol_Version, ?Study_Protocol_Parameters_Name, ?Study_Protocol_Parameters_Term_Accession_Number, ?Study_Protocol_Parameters_Term_Source_REF, ?Study_Protocol_Components_Name, ?Study_Protocol_Components_Type, ?Study_Protocol_Components_Type_Term_Accession_Number, ?Study_Protocol_Components_Type_Term_Source_REF, ?STUDY_CONTACTS, ?Study_Person_Last_Name, ?Study_Person_First_Name, ?Study_Person_Mid_Initials, ?Study_Person_Email, ?Study_Person_Phone, ?Study_Person_Fax, ?Study_Person_Address, ?Study_Person_Affiliation, ?Study_Person_Roles, ?Study_Person_Roles_Term_Accession_Number, ?Study_Person_Roles_Term_Source_REF)

Full Usage: ARCMock.InvestigationMetadataTokens(?ONTOLOGY_SOURCE_REFERENCE, ?Term_Source_Name, ?Term_Source_File, ?Term_Source_Version, ?Term_Source_Description, ?INVESTIGATION, ?Investigation_Identifier, ?Investigation_Title, ?Investigation_Description, ?Investigation_Submission_Date, ?Investigation_Public_Release_Date, ?INVESTIGATION_PUBLICATIONS, ?Investigation_Publication_PubMed_ID, ?Investigation_Publication_DOI, ?Investigation_Publication_Author_List, ?Investigation_Publication_Title, ?Investigation_Publication_Status, ?Investigation_Publication_Status_Term_Accession_Number, ?Investigation_Publication_Status_Term_Source_REF, ?INVESTIGATION_CONTACTS, ?Investigation_Person_Last_Name, ?Investigation_Person_First_Name, ?Investigation_Person_Mid_Initials, ?Investigation_Person_Email, ?Investigation_Person_Phone, ?Investigation_Person_Fax, ?Investigation_Person_Address, ?Investigation_Person_Affiliation, ?Investigation_Person_Roles, ?Investigation_Person_Roles_Term_Accession_Number, ?Investigation_Person_Roles_Term_Source_REF, ?Comment_ORCID, ?STUDY, ?Study_Identifier, ?Study_Title, ?Study_Description, ?Study_Submission_Date, ?Study_Public_Release_Date, ?Study_File_Name, ?STUDY_DESIGN_DESCRIPTORS, ?Study_Design_Type, ?Study_Design_Type_Term_Accession_Number, ?Study_Design_Type_Term_Source_REF, ?STUDY_PUBLICATIONS, ?Study_Publication_PubMed_ID, ?Study_Publication_DOI, ?Study_Publication_Author_List, ?Study_Publication_Title, ?Study_Publication_Status, ?Study_Publication_Status_Term_Accession_Number, ?Study_Publication_Status_Term_Source_REF, ?STUDY_FACTORS, ?Study_Factor_Name, ?Study_Factor_Type, ?Study_Factor_Type_Term_Accession_Number, ?Study_Factor_Type_Term_Source_REF, ?STUDY_ASSAYS, ?Study_Assay_Measurement_Type, ?Study_Assay_Measurement_Type_Term_Accession_Number, ?Study_Assay_Measurement_Type_Term_Source_REF, ?Study_Assay_Technology_Type, ?Study_Assay_Technology_Type_Term_Accession_Number, ?Study_Assay_Technology_Type_Term_Source_REF, ?Study_Assay_Technology_Platform, ?Study_Assay_File_Name, ?STUDY_PROTOCOLS, ?Study_Protocol_Name, ?Study_Protocol_Type, ?Study_Protocol_Type_Term_Accession_Number, ?Study_Protocol_Type_Term_Source_REF, ?Study_Protocol_Description, ?Study_Protocol_URI, ?Study_Protocol_Version, ?Study_Protocol_Parameters_Name, ?Study_Protocol_Parameters_Term_Accession_Number, ?Study_Protocol_Parameters_Term_Source_REF, ?Study_Protocol_Components_Name, ?Study_Protocol_Components_Type, ?Study_Protocol_Components_Type_Term_Accession_Number, ?Study_Protocol_Components_Type_Term_Source_REF, ?STUDY_CONTACTS, ?Study_Person_Last_Name, ?Study_Person_First_Name, ?Study_Person_Mid_Initials, ?Study_Person_Email, ?Study_Person_Phone, ?Study_Person_Fax, ?Study_Person_Address, ?Study_Person_Affiliation, ?Study_Person_Roles, ?Study_Person_Roles_Term_Accession_Number, ?Study_Person_Roles_Term_Source_REF)

Parameters:
    ?ONTOLOGY_SOURCE_REFERENCE : string seq
    ?Term_Source_Name : string seq
    ?Term_Source_File : string seq
    ?Term_Source_Version : string seq
    ?Term_Source_Description : string seq
    ?INVESTIGATION : string seq
    ?Investigation_Identifier : string seq
    ?Investigation_Title : string seq
    ?Investigation_Description : string seq
    ?Investigation_Submission_Date : string seq
    ?Investigation_Public_Release_Date : string seq
    ?INVESTIGATION_PUBLICATIONS : string seq
    ?Investigation_Publication_PubMed_ID : string seq
    ?Investigation_Publication_DOI : string seq
    ?Investigation_Publication_Author_List : string seq
    ?Investigation_Publication_Title : string seq
    ?Investigation_Publication_Status : string seq
    ?Investigation_Publication_Status_Term_Accession_Number : string seq
    ?Investigation_Publication_Status_Term_Source_REF : string seq
    ?INVESTIGATION_CONTACTS : string seq
    ?Investigation_Person_Last_Name : string seq
    ?Investigation_Person_First_Name : string seq
    ?Investigation_Person_Mid_Initials : string seq
    ?Investigation_Person_Email : string seq
    ?Investigation_Person_Phone : string seq
    ?Investigation_Person_Fax : string seq
    ?Investigation_Person_Address : string seq
    ?Investigation_Person_Affiliation : string seq
    ?Investigation_Person_Roles : string seq
    ?Investigation_Person_Roles_Term_Accession_Number : string seq
    ?Investigation_Person_Roles_Term_Source_REF : string seq
    ?Comment_ORCID : string seq
    ?STUDY : string seq
    ?Study_Identifier : string seq
    ?Study_Title : string seq
    ?Study_Description : string seq
    ?Study_Submission_Date : string seq
    ?Study_Public_Release_Date : string seq
    ?Study_File_Name : string seq
    ?STUDY_DESIGN_DESCRIPTORS : string seq
    ?Study_Design_Type : string seq
    ?Study_Design_Type_Term_Accession_Number : string seq
    ?Study_Design_Type_Term_Source_REF : string seq
    ?STUDY_PUBLICATIONS : string seq
    ?Study_Publication_PubMed_ID : string seq
    ?Study_Publication_DOI : string seq
    ?Study_Publication_Author_List : string seq
    ?Study_Publication_Title : string seq
    ?Study_Publication_Status : string seq
    ?Study_Publication_Status_Term_Accession_Number : string seq
    ?Study_Publication_Status_Term_Source_REF : string seq
    ?STUDY_FACTORS : string seq
    ?Study_Factor_Name : string seq
    ?Study_Factor_Type : string seq
    ?Study_Factor_Type_Term_Accession_Number : string seq
    ?Study_Factor_Type_Term_Source_REF : string seq
    ?STUDY_ASSAYS : string seq
    ?Study_Assay_Measurement_Type : string seq
    ?Study_Assay_Measurement_Type_Term_Accession_Number : string seq
    ?Study_Assay_Measurement_Type_Term_Source_REF : string seq
    ?Study_Assay_Technology_Type : string seq
    ?Study_Assay_Technology_Type_Term_Accession_Number : string seq
    ?Study_Assay_Technology_Type_Term_Source_REF : string seq
    ?Study_Assay_Technology_Platform : string seq
    ?Study_Assay_File_Name : string seq
    ?STUDY_PROTOCOLS : string seq
    ?Study_Protocol_Name : string seq
    ?Study_Protocol_Type : string seq
    ?Study_Protocol_Type_Term_Accession_Number : string seq
    ?Study_Protocol_Type_Term_Source_REF : string seq
    ?Study_Protocol_Description : string seq
    ?Study_Protocol_URI : string seq
    ?Study_Protocol_Version : string seq
    ?Study_Protocol_Parameters_Name : string seq
    ?Study_Protocol_Parameters_Term_Accession_Number : string seq
    ?Study_Protocol_Parameters_Term_Source_REF : string seq
    ?Study_Protocol_Components_Name : string seq
    ?Study_Protocol_Components_Type : string seq
    ?Study_Protocol_Components_Type_Term_Accession_Number : string seq
    ?Study_Protocol_Components_Type_Term_Source_REF : string seq
    ?STUDY_CONTACTS : string seq
    ?Study_Person_Last_Name : string seq
    ?Study_Person_First_Name : string seq
    ?Study_Person_Mid_Initials : string seq
    ?Study_Person_Email : string seq
    ?Study_Person_Phone : string seq
    ?Study_Person_Fax : string seq
    ?Study_Person_Address : string seq
    ?Study_Person_Affiliation : string seq
    ?Study_Person_Roles : string seq
    ?Study_Person_Roles_Term_Accession_Number : string seq
    ?Study_Person_Roles_Term_Source_REF : string seq

Returns: CvParam list list

returns a mock list of CvParams lists which each represent a tokenized row of investigation metadata. each mandatory row is present, containing at least one CvParam annotated as MetadataSectionKey (the first column of an ISA-XLSX investigation metadata sheet). each row can be expanded with additional CvParams by setting the respective optional argument.

?ONTOLOGY_SOURCE_REFERENCE : string seq
?Term_Source_Name : string seq
?Term_Source_File : string seq
?Term_Source_Version : string seq
?Term_Source_Description : string seq
?INVESTIGATION : string seq
?Investigation_Identifier : string seq
?Investigation_Title : string seq
?Investigation_Description : string seq
?Investigation_Submission_Date : string seq
?Investigation_Public_Release_Date : string seq
?INVESTIGATION_PUBLICATIONS : string seq
?Investigation_Publication_PubMed_ID : string seq
?Investigation_Publication_DOI : string seq
?Investigation_Publication_Author_List : string seq
?Investigation_Publication_Title : string seq
?Investigation_Publication_Status : string seq
?Investigation_Publication_Status_Term_Accession_Number : string seq
?Investigation_Publication_Status_Term_Source_REF : string seq
?INVESTIGATION_CONTACTS : string seq
?Investigation_Person_Last_Name : string seq
?Investigation_Person_First_Name : string seq
?Investigation_Person_Mid_Initials : string seq
?Investigation_Person_Email : string seq
?Investigation_Person_Phone : string seq
?Investigation_Person_Fax : string seq
?Investigation_Person_Address : string seq
?Investigation_Person_Affiliation : string seq
?Investigation_Person_Roles : string seq
?Investigation_Person_Roles_Term_Accession_Number : string seq
?Investigation_Person_Roles_Term_Source_REF : string seq
?Comment_ORCID : string seq
?STUDY : string seq
?Study_Identifier : string seq
?Study_Title : string seq
?Study_Description : string seq
?Study_Submission_Date : string seq
?Study_Public_Release_Date : string seq
?Study_File_Name : string seq
?STUDY_DESIGN_DESCRIPTORS : string seq
?Study_Design_Type : string seq
?Study_Design_Type_Term_Accession_Number : string seq
?Study_Design_Type_Term_Source_REF : string seq
?STUDY_PUBLICATIONS : string seq
?Study_Publication_PubMed_ID : string seq
?Study_Publication_DOI : string seq
?Study_Publication_Author_List : string seq
?Study_Publication_Title : string seq
?Study_Publication_Status : string seq
?Study_Publication_Status_Term_Accession_Number : string seq
?Study_Publication_Status_Term_Source_REF : string seq
?STUDY_FACTORS : string seq
?Study_Factor_Name : string seq
?Study_Factor_Type : string seq
?Study_Factor_Type_Term_Accession_Number : string seq
?Study_Factor_Type_Term_Source_REF : string seq
?STUDY_ASSAYS : string seq
?Study_Assay_Measurement_Type : string seq
?Study_Assay_Measurement_Type_Term_Accession_Number : string seq
?Study_Assay_Measurement_Type_Term_Source_REF : string seq
?Study_Assay_Technology_Type : string seq
?Study_Assay_Technology_Type_Term_Accession_Number : string seq
?Study_Assay_Technology_Type_Term_Source_REF : string seq
?Study_Assay_Technology_Platform : string seq
?Study_Assay_File_Name : string seq
?STUDY_PROTOCOLS : string seq
?Study_Protocol_Name : string seq
?Study_Protocol_Type : string seq
?Study_Protocol_Type_Term_Accession_Number : string seq
?Study_Protocol_Type_Term_Source_REF : string seq
?Study_Protocol_Description : string seq
?Study_Protocol_URI : string seq
?Study_Protocol_Version : string seq
?Study_Protocol_Parameters_Name : string seq
?Study_Protocol_Parameters_Term_Accession_Number : string seq
?Study_Protocol_Parameters_Term_Source_REF : string seq
?Study_Protocol_Components_Name : string seq
?Study_Protocol_Components_Type : string seq
?Study_Protocol_Components_Type_Term_Accession_Number : string seq
?Study_Protocol_Components_Type_Term_Source_REF : string seq
?STUDY_CONTACTS : string seq
?Study_Person_Last_Name : string seq
?Study_Person_First_Name : string seq
?Study_Person_Mid_Initials : string seq
?Study_Person_Email : string seq
?Study_Person_Phone : string seq
?Study_Person_Fax : string seq
?Study_Person_Address : string seq
?Study_Person_Affiliation : string seq
?Study_Person_Roles : string seq
?Study_Person_Roles_Term_Accession_Number : string seq
?Study_Person_Roles_Term_Source_REF : string seq
Returns: CvParam list list

ARCMock.StudyMetadataTokens(?STUDY, ?Study_Identifier, ?Study_Title, ?Study_Description, ?Study_Submission_Date, ?Study_Public_Release_Date, ?Study_File_Name, ?STUDY_DESIGN_DESCRIPTORS, ?Study_Design_Type, ?Study_Design_Type_Term_Accession_Number, ?Study_Design_Type_Term_Source_REF, ?STUDY_PUBLICATIONS, ?Study_Publication_PubMed_ID, ?Study_Publication_DOI, ?Study_Publication_Author_List, ?Study_Publication_Title, ?Study_Publication_Status, ?Study_Publication_Status_Term_Accession_Number, ?Study_Publication_Status_Term_Source_REF, ?STUDY_FACTORS, ?Study_Factor_Name, ?Study_Factor_Type, ?Study_Factor_Type_Term_Accession_Number, ?Study_Factor_Type_Term_Source_REF, ?STUDY_ASSAYS, ?Study_Assay_Measurement_Type, ?Study_Assay_Measurement_Type_Term_Accession_Number, ?Study_Assay_Measurement_Type_Term_Source_REF, ?Study_Assay_Technology_Type, ?Study_Assay_Technology_Type_Term_Accession_Number, ?Study_Assay_Technology_Type_Term_Source_REF, ?Study_Assay_Technology_Platform, ?Study_Assay_File_Name, ?STUDY_PROTOCOLS, ?Study_Protocol_Name, ?Study_Protocol_Type, ?Study_Protocol_Type_Term_Accession_Number, ?Study_Protocol_Type_Term_Source_REF, ?Study_Protocol_Description, ?Study_Protocol_URI, ?Study_Protocol_Version, ?Study_Protocol_Parameters_Name, ?Study_Protocol_Parameters_Term_Accession_Number, ?Study_Protocol_Parameters_Term_Source_REF, ?Study_Protocol_Components_Name, ?Study_Protocol_Components_Type, ?Study_Protocol_Components_Type_Term_Accession_Number, ?Study_Protocol_Components_Type_Term_Source_REF, ?STUDY_CONTACTS, ?Study_Person_Last_Name, ?Study_Person_First_Name, ?Study_Person_Mid_Initials, ?Study_Person_Email, ?Study_Person_Phone, ?Study_Person_Fax, ?Study_Person_Address, ?Study_Person_Affiliation, ?Study_Person_Roles, ?Study_Person_Roles_Term_Accession_Number, ?Study_Person_Roles_Term_Source_REF)

Full Usage: ARCMock.StudyMetadataTokens(?STUDY, ?Study_Identifier, ?Study_Title, ?Study_Description, ?Study_Submission_Date, ?Study_Public_Release_Date, ?Study_File_Name, ?STUDY_DESIGN_DESCRIPTORS, ?Study_Design_Type, ?Study_Design_Type_Term_Accession_Number, ?Study_Design_Type_Term_Source_REF, ?STUDY_PUBLICATIONS, ?Study_Publication_PubMed_ID, ?Study_Publication_DOI, ?Study_Publication_Author_List, ?Study_Publication_Title, ?Study_Publication_Status, ?Study_Publication_Status_Term_Accession_Number, ?Study_Publication_Status_Term_Source_REF, ?STUDY_FACTORS, ?Study_Factor_Name, ?Study_Factor_Type, ?Study_Factor_Type_Term_Accession_Number, ?Study_Factor_Type_Term_Source_REF, ?STUDY_ASSAYS, ?Study_Assay_Measurement_Type, ?Study_Assay_Measurement_Type_Term_Accession_Number, ?Study_Assay_Measurement_Type_Term_Source_REF, ?Study_Assay_Technology_Type, ?Study_Assay_Technology_Type_Term_Accession_Number, ?Study_Assay_Technology_Type_Term_Source_REF, ?Study_Assay_Technology_Platform, ?Study_Assay_File_Name, ?STUDY_PROTOCOLS, ?Study_Protocol_Name, ?Study_Protocol_Type, ?Study_Protocol_Type_Term_Accession_Number, ?Study_Protocol_Type_Term_Source_REF, ?Study_Protocol_Description, ?Study_Protocol_URI, ?Study_Protocol_Version, ?Study_Protocol_Parameters_Name, ?Study_Protocol_Parameters_Term_Accession_Number, ?Study_Protocol_Parameters_Term_Source_REF, ?Study_Protocol_Components_Name, ?Study_Protocol_Components_Type, ?Study_Protocol_Components_Type_Term_Accession_Number, ?Study_Protocol_Components_Type_Term_Source_REF, ?STUDY_CONTACTS, ?Study_Person_Last_Name, ?Study_Person_First_Name, ?Study_Person_Mid_Initials, ?Study_Person_Email, ?Study_Person_Phone, ?Study_Person_Fax, ?Study_Person_Address, ?Study_Person_Affiliation, ?Study_Person_Roles, ?Study_Person_Roles_Term_Accession_Number, ?Study_Person_Roles_Term_Source_REF)

Parameters:
    ?STUDY : string seq
    ?Study_Identifier : string seq
    ?Study_Title : string seq
    ?Study_Description : string seq
    ?Study_Submission_Date : string seq
    ?Study_Public_Release_Date : string seq
    ?Study_File_Name : string seq
    ?STUDY_DESIGN_DESCRIPTORS : string seq
    ?Study_Design_Type : string seq
    ?Study_Design_Type_Term_Accession_Number : string seq
    ?Study_Design_Type_Term_Source_REF : string seq
    ?STUDY_PUBLICATIONS : string seq
    ?Study_Publication_PubMed_ID : string seq
    ?Study_Publication_DOI : string seq
    ?Study_Publication_Author_List : string seq
    ?Study_Publication_Title : string seq
    ?Study_Publication_Status : string seq
    ?Study_Publication_Status_Term_Accession_Number : string seq
    ?Study_Publication_Status_Term_Source_REF : string seq
    ?STUDY_FACTORS : string seq
    ?Study_Factor_Name : string seq
    ?Study_Factor_Type : string seq
    ?Study_Factor_Type_Term_Accession_Number : string seq
    ?Study_Factor_Type_Term_Source_REF : string seq
    ?STUDY_ASSAYS : string seq
    ?Study_Assay_Measurement_Type : string seq
    ?Study_Assay_Measurement_Type_Term_Accession_Number : string seq
    ?Study_Assay_Measurement_Type_Term_Source_REF : string seq
    ?Study_Assay_Technology_Type : string seq
    ?Study_Assay_Technology_Type_Term_Accession_Number : string seq
    ?Study_Assay_Technology_Type_Term_Source_REF : string seq
    ?Study_Assay_Technology_Platform : string seq
    ?Study_Assay_File_Name : string seq
    ?STUDY_PROTOCOLS : string seq
    ?Study_Protocol_Name : string seq
    ?Study_Protocol_Type : string seq
    ?Study_Protocol_Type_Term_Accession_Number : string seq
    ?Study_Protocol_Type_Term_Source_REF : string seq
    ?Study_Protocol_Description : string seq
    ?Study_Protocol_URI : string seq
    ?Study_Protocol_Version : string seq
    ?Study_Protocol_Parameters_Name : string seq
    ?Study_Protocol_Parameters_Term_Accession_Number : string seq
    ?Study_Protocol_Parameters_Term_Source_REF : string seq
    ?Study_Protocol_Components_Name : string seq
    ?Study_Protocol_Components_Type : string seq
    ?Study_Protocol_Components_Type_Term_Accession_Number : string seq
    ?Study_Protocol_Components_Type_Term_Source_REF : string seq
    ?STUDY_CONTACTS : string seq
    ?Study_Person_Last_Name : string seq
    ?Study_Person_First_Name : string seq
    ?Study_Person_Mid_Initials : string seq
    ?Study_Person_Email : string seq
    ?Study_Person_Phone : string seq
    ?Study_Person_Fax : string seq
    ?Study_Person_Address : string seq
    ?Study_Person_Affiliation : string seq
    ?Study_Person_Roles : string seq
    ?Study_Person_Roles_Term_Accession_Number : string seq
    ?Study_Person_Roles_Term_Source_REF : string seq

Returns: CvParam list list

returns a mock list of CvParams lists which each represent a tokenized row of study metadata. each mandatory row is present, containing at least one CvParam annotated as MetadataSectionKey (the first column of an ISA-XLSX study metadata sheet). each row can be expanded with additional CvParams by setting the respective optional argument.

?STUDY : string seq
?Study_Identifier : string seq
?Study_Title : string seq
?Study_Description : string seq
?Study_Submission_Date : string seq
?Study_Public_Release_Date : string seq
?Study_File_Name : string seq
?STUDY_DESIGN_DESCRIPTORS : string seq
?Study_Design_Type : string seq
?Study_Design_Type_Term_Accession_Number : string seq
?Study_Design_Type_Term_Source_REF : string seq
?STUDY_PUBLICATIONS : string seq
?Study_Publication_PubMed_ID : string seq
?Study_Publication_DOI : string seq
?Study_Publication_Author_List : string seq
?Study_Publication_Title : string seq
?Study_Publication_Status : string seq
?Study_Publication_Status_Term_Accession_Number : string seq
?Study_Publication_Status_Term_Source_REF : string seq
?STUDY_FACTORS : string seq
?Study_Factor_Name : string seq
?Study_Factor_Type : string seq
?Study_Factor_Type_Term_Accession_Number : string seq
?Study_Factor_Type_Term_Source_REF : string seq
?STUDY_ASSAYS : string seq
?Study_Assay_Measurement_Type : string seq
?Study_Assay_Measurement_Type_Term_Accession_Number : string seq
?Study_Assay_Measurement_Type_Term_Source_REF : string seq
?Study_Assay_Technology_Type : string seq
?Study_Assay_Technology_Type_Term_Accession_Number : string seq
?Study_Assay_Technology_Type_Term_Source_REF : string seq
?Study_Assay_Technology_Platform : string seq
?Study_Assay_File_Name : string seq
?STUDY_PROTOCOLS : string seq
?Study_Protocol_Name : string seq
?Study_Protocol_Type : string seq
?Study_Protocol_Type_Term_Accession_Number : string seq
?Study_Protocol_Type_Term_Source_REF : string seq
?Study_Protocol_Description : string seq
?Study_Protocol_URI : string seq
?Study_Protocol_Version : string seq
?Study_Protocol_Parameters_Name : string seq
?Study_Protocol_Parameters_Term_Accession_Number : string seq
?Study_Protocol_Parameters_Term_Source_REF : string seq
?Study_Protocol_Components_Name : string seq
?Study_Protocol_Components_Type : string seq
?Study_Protocol_Components_Type_Term_Accession_Number : string seq
?Study_Protocol_Components_Type_Term_Source_REF : string seq
?STUDY_CONTACTS : string seq
?Study_Person_Last_Name : string seq
?Study_Person_First_Name : string seq
?Study_Person_Mid_Initials : string seq
?Study_Person_Email : string seq
?Study_Person_Phone : string seq
?Study_Person_Fax : string seq
?Study_Person_Address : string seq
?Study_Person_Affiliation : string seq
?Study_Person_Roles : string seq
?Study_Person_Roles_Term_Accession_Number : string seq
?Study_Person_Roles_Term_Source_REF : string seq
Returns: CvParam list list

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